BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020D01SP1|AL427608
(986 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig276 836 0.0
>3x_Contig276
Length = 1075
Score = 836 bits (420), Expect = 0.0
Identities = 449/456 (98%), Gaps = 3/456 (0%)
Strand = Plus / Minus
Query: 526 tatatcacgtgataaacgccacagaaacaaccgtggcatgtctcttgtttacggttgatg 585
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1067 tatatcacgtgataaacgccacagaaacacccgtggcatgtctcttgtttacggttgatg 1008
Query: 586 aaaattttcacgagatccgggtaacaagtaataacttcgcagttattactacactgactg 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 aaaattttcacgagatccgggtaacaagtaataacttcgcagttattactacactgactg 948
Query: 646 ggagtagagaggatgagagatgtggtaaaacaagttccaccctcgcaacttcgtatcgta 705
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 947 gaagtagagaggatgagagatgtggtaaaacaagttccaccctcgcaact-cgtatcgta 889
Query: 706 tatcacgttatatcagttcttattactgagatgatttttgttccctgctagtgtcaaaaa 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 tatcacgttatatcagttcttattactgagatgatttttgttccctgctagtgtcaaaaa 829
Query: 766 aaactgcgcaacggctactgggctgcctttatatgtdctgacagtttcactgcccttgac 825
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 828 aaactgcgcaacggctactgggctgcctttatatgtactgacagtttcactgcccttgac 769
Query: 826 ggtattactgtatatataatgttaaatatctgcctggaagtgctcatagatataccaaat 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ggtattactgtatatataatgttaaatatctgcctggaagtgctcatagatataccaaat 709
Query: 886 acgtcccaaatattattgacacaaattatggcttgcgagtagcataagattgcctcgtaa 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 acgtcccaaatattattgacacaaattatggcttgcgagtagcataagattgcctcgtaa 649
Query: 946 ttgacgagtat-cactgtgttt-cactgtcgtcsgc 979
||||||||||| |||||||||| |||||||||| ||
Sbjct: 648 ttgacgagtatccactgtgtttccactgtcgtccgc 613
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6415
Number of Sequences: 1807
Number of extensions: 6415
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)